PH01000445G0760's details annotation
1.Annotation
ICBR annotation: growth regulator related protein, putative, expressed
Blast result AT3G03810 : 0.00E+00
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01000445
Strand: +
| Region | Start | End |
| gene | 565931 | 572151 |
| mRNA | 565931 | 572151 |
| exon | 565931 | 566621 |
| exon | 566799 | 566883 |
| exon | 567411 | 567478 |
| exon | 567554 | 567642 |
| exon | 567761 | 568004 |
| exon | 568093 | 568205 |
| exon | 568597 | 568687 |
| exon | 568796 | 568942 |
| exon | 569612 | 570165 |
| exon | 570446 | 572151 |
| CDS | 566469 | 566621 |
| CDS | 566799 | 566883 |
| CDS | 567411 | 567478 |
| CDS | 567554 | 567642 |
| CDS | 567761 | 568004 |
| CDS | 568093 | 568205 |
| CDS | 568597 | 568687 |
| CDS | 568796 | 568942 |
| CDS | 569612 | 570165 |
| CDS | 570446 | 570884 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 89 | 391 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.