PH01000445G0770's details annotation
1.Annotation
ICBR annotation: agenet domain containing protein, putative, expressed
Blast result AT1G09320 : 2.70E-32
Blast annotation: agenet domain-containing protein
2.Location
Scaffold: PH01000445
Strand: +
| Region | Start | End |
| gene | 573091 | 578328 |
| mRNA | 573091 | 578328 |
| exon | 573091 | 573857 |
| exon | 573937 | 574130 |
| exon | 574192 | 574261 |
| exon | 575012 | 575158 |
| exon | 575303 | 575859 |
| exon | 576809 | 577225 |
| exon | 577684 | 578328 |
| CDS | 573683 | 573857 |
| CDS | 573937 | 574130 |
| CDS | 574192 | 574261 |
| CDS | 575012 | 575158 |
| CDS | 575303 | 575859 |
| CDS | 576809 | 577225 |
| CDS | 577684 | 577707 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05641.11 | Agenet | 248 | 310 |
| PF05641.11 | Agenet | 392 | 451 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.