PH01000451G0900's details annotation
1.Annotation
ICBR annotation: mTERF domain containing protein, expressed
Blast result AT3G60400 : 1.20E-73
Blast annotation: Mitochondrial transcription termination factor family protein
2.Location
Scaffold: PH01000451
Strand: +
| Region | Start | End |
| gene | 685070 | 687589 |
| mRNA | 685070 | 687589 |
| exon | 685070 | 687589 |
| CDS | 685523 | 686881 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000458 | mTERF Transcription_Regulator(from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | mTERF |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02536.13 | mTERF | 277 | 412 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.