PH01000461G0070's details annotation
1.Annotation
ICBR annotation: regulatory protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000461
Strand: -
| Region | Start | End |
| gene | 25199 | 32548 |
| mRNA | 25199 | 32548 |
| exon | 25199 | 25848 |
| exon | 27236 | 27397 |
| exon | 27689 | 27703 |
| exon | 28512 | 28572 |
| exon | 29592 | 29959 |
| exon | 31068 | 31430 |
| exon | 32335 | 32548 |
| CDS | 25387 | 25848 |
| CDS | 27236 | 27397 |
| CDS | 27689 | 27703 |
| CDS | 28512 | 28572 |
| CDS | 29592 | 29959 |
| CDS | 31068 | 31430 |
| CDS | 32335 | 32379 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03407.15 | Nucleotid_trans | 67 | 138 |
| PF03407.15 | Nucleotid_trans | 390 | 448 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0015095 | magnesium ion transmembrane transporter activity |
| GO:0015693 | magnesium ion transport |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.