PH01000462G0610's details annotation
1.Annotation
ICBR annotation: xylosyltransferase, putative, expressed
Blast result AT4G03340 : 2.00E-160
Blast annotation: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
2.Location
Scaffold: PH01000462
Strand: -
| Region | Start | End |
| gene | 450203 | 458877 |
| mRNA | 450203 | 458877 |
| exon | 450203 | 450369 |
| exon | 452281 | 452821 |
| exon | 456534 | 456649 |
| exon | 456770 | 456845 |
| exon | 457438 | 458877 |
| CDS | 450279 | 450369 |
| CDS | 452281 | 452821 |
| CDS | 456534 | 456649 |
| CDS | 456770 | 456845 |
| CDS | 457438 | 458101 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT14 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02485.20 | Branch | 110 | 369 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.