PH01000465G0030's details annotation
1.Annotation
ICBR annotation: importin subunit beta, putative, expressed
Blast result AT3G08960 : 8.10E-37
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01000465
Strand: -
| Region | Start | End |
| gene | 19962 | 23049 |
| mRNA | 19962 | 23049 |
| exon | 19962 | 20126 |
| exon | 20260 | 20530 |
| exon | 22203 | 22312 |
| exon | 22419 | 23049 |
| CDS | 20088 | 20126 |
| CDS | 20260 | 20530 |
| CDS | 22203 | 22312 |
| CDS | 22419 | 22559 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03810.18 | IBN_N | 29 | 83 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
| GO:0005643 | nuclear pore |
| GO:0006886 | intracellular protein transport |
| GO:0008565 | protein transporter activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.