Gene details

Annotation of co-expression genes

PH01000467G0700's details annotation

1.Annotation

ICBR annotation: dehydrogenase, putative, expressed

Blast result AT5G14590 : 0.00E+00
Blast annotation: Isocitrate/isopropylmalate dehydrogenase family protein

2.Location

Scaffold: PH01000467
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	null	null

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00180.19	Iso_dh	63	454

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Citrate cycle (TCA cycle)	isocitrate dehydrogenase [EC:1.1.1.42]	ko00020	K00031
Carbon fixation pathways in prokaryotes	isocitrate dehydrogenase [EC:1.1.1.42]	ko00720	K00031
Glutathione metabolism	isocitrate dehydrogenase [EC:1.1.1.42]	ko00480	K00031
Peroxisome	isocitrate dehydrogenase [EC:1.1.1.42]	ko04146	K00031

10.Gene Ontology

GO Accession	GO Annotation
GO:0000287	magnesium ion binding
GO:0004450	isocitrate dehydrogenase (NADP+) activity
GO:0006102	isocitrate metabolic process
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287	NAD binding
GO:0055114	oxidation-reduction process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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