PH01000472G0410's details annotation
1.Annotation
ICBR annotation: NADPH reductase, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000472
Strand: -
| Region | Start | End |
| gene | 292603 | 295429 |
| mRNA | 292603 | 295429 |
| exon | 292603 | 293239 |
| exon | 293466 | 293502 |
| exon | 293790 | 293847 |
| exon | 293984 | 294060 |
| exon | 294184 | 294208 |
| exon | 294313 | 295429 |
| CDS | 293190 | 293239 |
| CDS | 293466 | 293502 |
| CDS | 293790 | 293847 |
| CDS | 293984 | 294060 |
| CDS | 294184 | 294208 |
| CDS | 294313 | 294617 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00258.24 | Flavodoxin_1 | 88 | 155 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005506 | iron ion binding |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.