PH01000474G0270's details annotation
1.Annotation
ICBR annotation: acyl-CoA synthetase protein, putative, expressed
Blast result AT5G27600 : 4.60E-31
Blast annotation: long-chain acyl-CoA synthetase 7
2.Location
Scaffold: PH01000474
Strand: -
| Region | Start | End |
| gene | 171014 | 174307 |
| mRNA | 171014 | 174307 |
| exon | 171014 | 171191 |
| exon | 171264 | 171350 |
| exon | 171458 | 171544 |
| exon | 171665 | 171715 |
| exon | 171951 | 172039 |
| exon | 172437 | 172818 |
| exon | 172872 | 174307 |
| CDS | 171096 | 171191 |
| CDS | 171264 | 171350 |
| CDS | 171458 | 171544 |
| CDS | 171665 | 171715 |
| CDS | 171951 | 172039 |
| CDS | 172437 | 172818 |
| CDS | 172872 | 172943 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.