PH01000477G0160's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G19300 : 3.10E-25
Blast annotation: -
2.Location
Scaffold: PH01000477
Strand: +
| Region | Start | End |
| gene | 73319 | 74920 |
| mRNA | 73319 | 74920 |
| exon | 73319 | 73729 |
| exon | 73788 | 73926 |
| exon | 74007 | 74073 |
| exon | 74526 | 74920 |
| CDS | 73356 | 73729 |
| CDS | 73788 | 73926 |
| CDS | 74007 | 74073 |
| CDS | 74526 | 74530 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02598.16 | Methyltrn_RNA_3 | 139 | 193 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.