PH01000502G0110's details annotation
1.Annotation
ICBR annotation: fiber protein Fb14, putative
Blast result AT3G62790 : 5.20E-38
Blast annotation: NADH-ubiquinone oxidoreductase-related
2.Location
Scaffold: PH01000502
Strand: +
| Region | Start | End |
| gene | 108327 | 111620 |
| mRNA | 108327 | 111620 |
| exon | 108327 | 109950 |
| exon | 110780 | 111620 |
| CDS | 109801 | 109950 |
| CDS | 110780 | 110887 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000665 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10200.8 | Ndufs5 | 11 | 66 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Oxidative phosphorylation | NADH dehydrogenase (ubiquinone) Fe-S protein 5 [EC:1.6.5.3;EC:1.6.99.3] | ko00190 | K03938 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.