Gene details

Annotation of co-expression genes

PH01000502G0840's details annotation

1.Annotation

ICBR annotation: T-complex protein, putative, expressed

Blast result AT3G23990 : 5.40E-45
Blast annotation: heat shock protein 60

2.Location

Scaffold: PH01000502
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000760	CMGC_CLK (from iTAK) cullin-RING ubiquitin ligase complex, cytoplasm, SET Transcription_Regulator(from iTAK)
coexpression network	CFinderM000780	Lysine_degradation Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis SET Transcription_Regulator(from iTAK) endoplasmic reticulum membrane, GPI anchor biosynthetic process, protein refolding,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00118.23	Cpn60_TCP1	83	227

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005524	ATP binding
GO:0005737	cytoplasm
GO:0042026	protein refolding
GO:0044267	cellular protein metabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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