PH01000504G0460's details annotation
1.Annotation
ICBR annotation: uncharacterized aarF domain-containing protein kinase 4, putative, expressed
Blast result AT4G01660 : 4.00E-171
Blast annotation: ABC transporter 1
2.Location
Scaffold: PH01000504
Strand: +
| Region | Start | End |
| gene | 347734 | 352822 |
| mRNA | 347734 | 352822 |
| exon | 347734 | 348795 |
| exon | 348927 | 349155 |
| exon | 349264 | 349416 |
| exon | 350042 | 350200 |
| exon | 350565 | 350724 |
| exon | 350846 | 350949 |
| exon | 351940 | 352056 |
| exon | 352163 | 352822 |
| CDS | 348260 | 348795 |
| CDS | 348927 | 349155 |
| CDS | 349264 | 349416 |
| CDS | 350042 | 350200 |
| CDS | 350565 | 350724 |
| CDS | 350846 | 350949 |
| CDS | 351940 | 352056 |
| CDS | 352163 | 352552 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03109.15 | ABC1 | 282 | 396 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.