PH01000511G0740's details annotation
1.Annotation
ICBR annotation: MCM10 - Putative minichromosome maintenance MCM protein 10, expressed
Blast result AT2G20980 : 6.90E-78
Blast annotation: minichromosome maintenance 10
2.Location
Scaffold: PH01000511
Strand: -
| Region | Start | End |
| gene | 439693 | 447800 |
| mRNA | 439693 | 447800 |
| exon | 439693 | 442492 |
| exon | 442778 | 442853 |
| exon | 442942 | 443014 |
| exon | 443139 | 443203 |
| exon | 445583 | 445717 |
| exon | 445873 | 445919 |
| exon | 446047 | 446080 |
| exon | 446637 | 446761 |
| exon | 446858 | 447800 |
| CDS | 442409 | 442492 |
| CDS | 442778 | 442853 |
| CDS | 442942 | 443014 |
| CDS | 443139 | 443203 |
| CDS | 445583 | 445717 |
| CDS | 445873 | 445919 |
| CDS | 446047 | 446080 |
| CDS | 446637 | 446761 |
| CDS | 446858 | 447559 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09329.10 | zf-primase | 252 | 297 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005634 | nucleus |
| GO:0006260 | DNA replication |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.