Gene details

Annotation of co-expression genes

PH01000512G0150's details annotation

1.Annotation

ICBR annotation: bromodomain containing protein, expressed

Blast result AT1G06230 : 1.10E-80
Blast annotation: global transcription factor group E4

2.Location

Scaffold: PH01000512
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000763	retromer complex, Golgi_transport_complex intra-Golgi vesicle-mediated transport, vacuolar transport, RNA-dependent DNA replication,
coexpression network	CFinderM001115	vacuolar_proton-transporting_V-type_ATPase,_V0_domain proton-transporting V-type ATPase, V0 domain, ATP hydrolysis coupled proton transport, MYB_related Transcription_Regulator(from PlantTFDB) MYB-related Transcription_Regulator(from iTAK) Oxidative_phosphorylation Phagosome
coexpression network	CFinderM001348	retrograde vesicle-mediated transport, Golgi to ER, glycolipid transport, COPI vesicle coat, clathrin adaptor complex, glycolipid binding, glycolipid transporter activity, MYB_related Transcription_Regulator(from PlantTFDB) MYB-related Transcription_Regulator(from iTAK)
coexpression network	CFinderM001616	intra-Golgi vesicle-mediated transport, Golgi organization, Golgi_transport_complex mRNA_surveillance_pathway

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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