PH01000514G0760's details annotation
1.Annotation
ICBR annotation: puromycin-sensitive aminopeptidase, putative, expressed
Blast result AT4G33090 : 5.00E-124
Blast annotation: aminopeptidase M1
2.Location
Scaffold: PH01000514
Strand: +
| Region | Start | End |
| gene | 501356 | 507230 |
| mRNA | 501356 | 507230 |
| exon | 501356 | 503156 |
| exon | 503637 | 503782 |
| exon | 503858 | 503960 |
| exon | 504728 | 504802 |
| exon | 504912 | 504973 |
| exon | 505729 | 505882 |
| exon | 506202 | 506306 |
| exon | 506382 | 507230 |
| CDS | 502917 | 503156 |
| CDS | 503637 | 503782 |
| CDS | 503858 | 503960 |
| CDS | 504728 | 504802 |
| CDS | 504912 | 504973 |
| CDS | 505729 | 505882 |
| CDS | 506202 | 506306 |
| CDS | 506382 | 506663 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01433.19 | Peptidase_M1 | 209 | 337 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006508 | proteolysis |
| GO:0008237 | metallopeptidase activity |
| GO:0008270 | zinc ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.