PH01000517G0580's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G42040 : 9.50E-16
Blast annotation: -
2.Location
Scaffold: PH01000517
Strand: -
| Region | Start | End |
| gene | 400064 | 402132 |
| mRNA | 400064 | 402132 |
| exon | 400064 | 400593 |
| exon | 400818 | 401317 |
| exon | 401708 | 401775 |
| exon | 401880 | 402132 |
| CDS | 400280 | 400593 |
| CDS | 400818 | 401317 |
| CDS | 401708 | 401775 |
| CDS | 401880 | 402059 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08879.9 | WRC | 199 | 235 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.