PH01000526G0490's details annotation
1.Annotation
ICBR annotation: auxilin, putative, expressed
Blast result AT4G12770 : 3.80E-75
Blast annotation: Chaperone DnaJ-domain superfamily protein
2.Location
Scaffold: PH01000526
Strand: +
| Region | Start | End |
| gene | 358464 | 368338 |
| mRNA | 358464 | 368338 |
| exon | 358464 | 359147 |
| exon | 359647 | 360266 |
| exon | 361704 | 363498 |
| exon | 363578 | 363710 |
| exon | 363829 | 363899 |
| exon | 364026 | 364091 |
| exon | 364278 | 364367 |
| exon | 367001 | 367177 |
| exon | 367477 | 368338 |
| CDS | 359088 | 359147 |
| CDS | 359647 | 360266 |
| CDS | 361704 | 363498 |
| CDS | 363578 | 363710 |
| CDS | 363829 | 363899 |
| CDS | 364026 | 364091 |
| CDS | 364278 | 364367 |
| CDS | 367001 | 367177 |
| CDS | 367477 | 367611 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.