PH01000528G0660's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G54190 : 0.00E+00
Blast annotation: Transducin/WD40 repeat-like superfamily protein
2.Location
Scaffold: PH01000528
Strand: -
| Region | Start | End |
| gene | 382424 | 387899 |
| mRNA | 382424 | 387899 |
| exon | 382424 | 383443 |
| exon | 383781 | 384051 |
| exon | 384147 | 384339 |
| exon | 384715 | 384795 |
| exon | 384872 | 384997 |
| exon | 385085 | 385235 |
| exon | 385307 | 385451 |
| exon | 386426 | 387899 |
| CDS | 383235 | 383443 |
| CDS | 383781 | 384051 |
| CDS | 384147 | 384339 |
| CDS | 384715 | 384795 |
| CDS | 384872 | 384997 |
| CDS | 385085 | 385235 |
| CDS | 385307 | 385451 |
| CDS | 386426 | 386467 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.