PH01000532G0950's details annotation
1.Annotation
ICBR annotation: calcium-binding EF hand family protein, putative, expressed
Blast result AT4G38810 : 2.00E-22
Blast annotation: Calcium-binding EF-hand family protein
2.Location
Scaffold: PH01000532
Strand: +
| Region | Start | End |
| gene | 594534 | 595852 |
| mRNA | 594534 | 595852 |
| exon | 594534 | 594866 |
| exon | 595154 | 595852 |
| CDS | 594582 | 594866 |
| CDS | 595154 | 595213 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000097 | GT59 GlycosylTransferases mRNA_cleavage_factor_complex Other_types_of_O-glycan_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.