PH01000535G0790's details annotation
1.Annotation
ICBR annotation: WRKY DNA-binding domain containing protein, expressed
Blast result AT1G30650 : 5.80E-48
Blast annotation: WRKY DNA-binding protein 14
2.Location
Scaffold: PH01000535
Strand: -
| Region | Start | End |
| gene | 628631 | 634413 |
| mRNA | 628631 | 634413 |
| exon | 628631 | 629334 |
| exon | 632366 | 632509 |
| exon | 633160 | 634413 |
| CDS | 628806 | 629334 |
| CDS | 632366 | 632509 |
| CDS | 633160 | 633596 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | WRKY |
| Transcription_Regulator(from PlantTFDB) | WRKY |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03106.14 | WRKY | 175 | 232 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003700 | sequence-specific DNA binding transcription factor activity |
| GO:0006355 | regulation of transcription, DNA-dependent |
| GO:0043565 | sequence-specific DNA binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.