Gene details

Annotation of co-expression genes

PH01000541G0540's details annotation

1.Annotation

ICBR annotation: eukaryotic translation initiation factor 3 subunit E, putative, expressed

Blast result AT3G57290 : 3.00E-174
Blast annotation: eukaryotic translation initiation factor 3E

2.Location

Scaffold: PH01000541
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000495	SNF2 Transcription_Regulator(from iTAK) proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair, ribosome biogenesis, eukaryotic translation initiation factor 3 complex, nucleolus, helicase activity,
coexpression network	CFinderM001702	ribosome biogenesis, nucleolus, eukaryotic translation initiation factor 3 complex, RNA_transport

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
RNA transport	translation initiation factor 3 subunit E	ko03013	K03250

10.Gene Ontology

GO Accession	GO Annotation
GO:0003743	translation initiation factor activity
GO:0005515	protein binding
GO:0005737	cytoplasm
GO:0005852	eukaryotic translation initiation factor 3 complex

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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