PH01000549G0420's details annotation
1.Annotation
ICBR annotation: Ser/Thr protein phosphatase family protein, putative, expressed
Blast result AT1G13900 : 0.00E+00
Blast annotation: Purple acid phosphatases superfamily protein
2.Location
Scaffold: PH01000549
Strand: -
| Region | Start | End |
| gene | 324940 | 331315 |
| mRNA | 324940 | 331315 |
| exon | 324940 | 327817 |
| exon | 329445 | 331315 |
| CDS | 326549 | 327817 |
| CDS | 329445 | 330146 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16656.4 | Pur_ac_phosph_N | 146 | 248 |
| PF00149.27 | Metallophos | 263 | 489 |
| PF14008.5 | Metallophos_C | 512 | 580 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003993 | acid phosphatase activity |
| GO:0016787 | hydrolase activity |
| GO:0046872 | metal ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.