PH01000552G0240's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G54500 : 2.90E-34
Blast annotation: -
2.Location
Scaffold: PH01000552
Strand: +
| Region | Start | End |
| gene | 223202 | 232104 |
| mRNA | 223202 | 232104 |
| exon | 223202 | 223569 |
| exon | 225863 | 225978 |
| exon | 226881 | 227250 |
| exon | 227370 | 227487 |
| exon | 227612 | 227717 |
| exon | 227819 | 227914 |
| exon | 227994 | 228089 |
| exon | 230216 | 230938 |
| exon | 231057 | 231305 |
| exon | 232025 | 232104 |
| CDS | 223413 | 223569 |
| CDS | 225863 | 225978 |
| CDS | 226881 | 227250 |
| CDS | 227370 | 227487 |
| CDS | 227612 | 227717 |
| CDS | 227819 | 227914 |
| CDS | 227994 | 228089 |
| CDS | 230216 | 230938 |
| CDS | 231057 | 231305 |
| CDS | 232025 | 232036 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.