PH01000558G0420's details annotation 1.Annotation ICBR annotation: homeobox and START domains containing protein, putative, expressed
Blast result AT4G21750 : 3.00E-153 Blast annotation: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 2.Location Scaffold: PH01000558 Strand: - Region | Start | End | gene | 273174 | 280471 | mRNA | 273174 | 280471 | exon | 273174 | 273651 | exon | 273766 | 273893 | exon | 274232 | 274406 | exon | 274492 | 274587 | exon | 274669 | 274940 | exon | 275062 | 275236 | exon | 275362 | 275562 | exon | 279005 | 279122 | exon | 279690 | 279949 | exon | 280402 | 280471 | CDS | 273451 | 273651 | CDS | 273766 | 273893 | CDS | 274232 | 274406 | CDS | 274492 | 274587 | CDS | 274669 | 274940 | CDS | 275062 | 275236 | CDS | 275362 | 275562 | CDS | 279005 | 279122 | CDS | 279690 | 279949 | CDS | 280402 | 280434 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000056 | HD-ZIP Transcription_Regulator(from PlantTFDB) HB-HD-ZIP Transcription_Regulator(from iTAK) Biosynthesis_of_unsaturated_fatty_acids Fatty_acid_biosynthesis nucleus, transition metal ion binding, acyl-[acyl-carrier-protein] desaturase activity, fatty acid metabolic process, lipid biosynthetic process, sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity, fatty acid biosynthetic process, YABBY Transcription_Regulator(from PlantTFDB) C2C2-YABBY Transcription_Regulator(from iTAK) lipase activity, Rho GDP-dissociation inhibitor activity,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | HB-HD-ZIP | Transcription_Regulator(from PlantTFDB) | HD-ZIP |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00046.28 | Homeobox | 82 | 137 | PF01852.18 | START | 138 | 247 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003677 | DNA binding | GO:0003700 | sequence-specific DNA binding transcription factor activity | GO:0005634 | nucleus | GO:0006355 | regulation of transcription, DNA-dependent | GO:0043565 | sequence-specific DNA binding |
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