PH01000561G0400's details annotation
1.Annotation
ICBR annotation: T-complex protein 11, putative, expressed
Blast result AT1G22930 : 0.00E+00
Blast annotation: T-complex protein 11
2.Location
Scaffold: PH01000561
Strand: +
| Region | Start | End |
| gene | 288784 | 295339 |
| mRNA | 288784 | 295339 |
| exon | 288784 | 289103 |
| exon | 289626 | 289683 |
| exon | 290724 | 290758 |
| exon | 291152 | 291273 |
| exon | 291364 | 291915 |
| exon | 292014 | 293556 |
| exon | 293723 | 293956 |
| exon | 294071 | 294333 |
| exon | 294435 | 295339 |
| CDS | 289038 | 289103 |
| CDS | 289626 | 289683 |
| CDS | 290724 | 290758 |
| CDS | 291152 | 291273 |
| CDS | 291364 | 291915 |
| CDS | 292014 | 293556 |
| CDS | 293723 | 293956 |
| CDS | 294071 | 294333 |
| CDS | 294435 | 294903 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05794.12 | Tcp11 | 652 | 1112 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.