PH01000566G0350's details annotation
1.Annotation
ICBR annotation: glyoxalase family protein, putative, expressed
Blast result AT1G67280 : 1.20E-49
Blast annotation: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
2.Location
Scaffold: PH01000566
Strand: -
| Region | Start | End |
| gene | 254934 | 257107 |
| mRNA | 254934 | 257107 |
| exon | 254934 | 255730 |
| exon | 255845 | 255985 |
| exon | 256072 | 256188 |
| exon | 256264 | 256311 |
| exon | 256739 | 256803 |
| exon | 256902 | 257107 |
| CDS | 255689 | 255730 |
| CDS | 255845 | 255985 |
| CDS | 256072 | 256188 |
| CDS | 256264 | 256311 |
| CDS | 256739 | 256803 |
| CDS | 256902 | 257004 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00903.24 | Glyoxalase | 59 | 157 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.