PH01000568G0660's details annotation
1.Annotation
ICBR annotation: aldose 1-epimerase, putative, expressed
Blast result AT3G61610 : 3.00E-135
Blast annotation: Galactose mutarotase-like superfamily protein
2.Location
Scaffold: PH01000568
Strand: +
| Region | Start | End |
| gene | 458938 | 464828 |
| mRNA | 458938 | 464828 |
| exon | 458938 | 460777 |
| exon | 460906 | 460980 |
| exon | 461638 | 461694 |
| exon | 461827 | 461990 |
| exon | 462645 | 462779 |
| exon | 463460 | 463562 |
| exon | 464124 | 464223 |
| exon | 464261 | 464828 |
| CDS | 460697 | 460777 |
| CDS | 460906 | 460980 |
| CDS | 461638 | 461694 |
| CDS | 461827 | 461990 |
| CDS | 462645 | 462779 |
| CDS | 463460 | 463562 |
| CDS | 464124 | 464223 |
| CDS | 464261 | 464520 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01263.19 | Aldose_epim | 14 | 306 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycolysis / Gluconeogenesis | glucose-6-phosphate 1-epimerase [EC:5.1.3.15] | ko00010 | K01792 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016853 | isomerase activity |
| GO:0030246 | carbohydrate binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.