PH01000578G0550's details annotation
1.Annotation
ICBR annotation: amino acid permease family protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000578
Strand: +
| Region | Start | End |
| gene | 386784 | 390468 |
| mRNA | 386784 | 390468 |
| exon | 386784 | 387763 |
| exon | 388233 | 388311 |
| exon | 388897 | 388944 |
| exon | 389072 | 389128 |
| exon | 389756 | 390468 |
| CDS | 387654 | 387763 |
| CDS | 388233 | 388311 |
| CDS | 388897 | 388944 |
| CDS | 389072 | 389128 |
| CDS | 389756 | 389839 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000768 | peptidyl-prolyl cis-trans isomerase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04667.16 | Endosulfine | 59 | 98 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.