PH01000580G0120's details annotation
1.Annotation
ICBR annotation: diacylglycerol kinase 1, putative, expressed
Blast result AT5G07920 : 1.00E-175
Blast annotation: diacylglycerol kinase1
2.Location
Scaffold: PH01000580
Strand: -
| Region | Start | End |
| gene | 93288 | 98353 |
| mRNA | 93288 | 98353 |
| exon | 93288 | 94208 |
| exon | 94282 | 94419 |
| exon | 94511 | 94675 |
| exon | 94955 | 95074 |
| exon | 96059 | 96135 |
| exon | 96228 | 96594 |
| exon | 97017 | 97354 |
| exon | 97472 | 97558 |
| exon | 97889 | 98353 |
| CDS | 94059 | 94208 |
| CDS | 94282 | 94419 |
| CDS | 94511 | 94675 |
| CDS | 94955 | 95074 |
| CDS | 96059 | 96135 |
| CDS | 96228 | 96594 |
| CDS | 97017 | 97354 |
| CDS | 97472 | 97558 |
| CDS | 97889 | 98138 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001034 | STE_STE20-YSK (from iTAK) protein phosphatase type 2A complex, glycolipid_6-alpha-mannosyltransferase_activity GDP-Man:Man1GlcNAc2-PP-Dol_alpha-1,3-mannosyltransferase_activity C3H Transcription_Regulator(from PlantTFDB) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00781.23 | DAGK_cat | 196 | 296 |
| PF00609.18 | DAGK_acc | 343 | 499 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycerolipid metabolism | diacylglycerol kinase (ATP dependent) [EC:2.7.1.-] | ko00561 | K00901 |
| Glycerophospholipid metabolism | diacylglycerol kinase (ATP dependent) [EC:2.7.1.107] | ko00564 | K00901 |
| Phosphatidylinositol signaling system | diacylglycerol kinase (ATP dependent) [EC:2.7.1.107] | ko04070 | K00901 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003951 | NAD+ kinase activity |
| GO:0004143 | diacylglycerol kinase activity |
| GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway |
| GO:0008152 | metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.