PH01000580G0820's details annotation
1.Annotation
ICBR annotation: OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed
Blast result AT5G24260 : 0.00E+00
Blast annotation: prolyl oligopeptidase family protein
2.Location
Scaffold: PH01000580
Strand: -
| Region | Start | End |
| gene | 576044 | 581122 |
| mRNA | 576044 | 581122 |
| exon | 576044 | 576777 |
| exon | 579061 | 580173 |
| exon | 580253 | 580282 |
| exon | 580532 | 581122 |
| CDS | 576226 | 576777 |
| CDS | 579061 | 580173 |
| CDS | 580253 | 580282 |
| CDS | 580532 | 580678 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00930.20 | DPPIV_N | 44 | 327 |
| PF00326.20 | Peptidase_S9 | 415 | 612 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006508 | proteolysis |
| GO:0008236 | serine-type peptidase activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.