PH01000591G0530's details annotation
1.Annotation
ICBR annotation: hypothetical_protein
Blast result AT5G18980 : 4.50E-54
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01000591
Strand: +
| Region | Start | End |
| gene | 299688 | 303195 |
| mRNA | 299688 | 303195 |
| exon | 299688 | 300348 |
| exon | 300964 | 302638 |
| exon | 302744 | 303195 |
| CDS | 300140 | 300348 |
| CDS | 300964 | 302638 |
| CDS | 302744 | 303145 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001148 | RLK-Pelle_LRR-VI-1 (from iTAK) exocyst, vesicle docking involved in exocytosis, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.