PH01000604G0940's details annotation
1.Annotation
ICBR annotation: pectinacetylesterase domain containing protein, expressed
Blast result AT3G09410 : 6.00E-123
Blast annotation: Pectinacetylesterase family protein
2.Location
Scaffold: PH01000604
Strand: +
| Region | Start | End |
| gene | 530471 | 532621 |
| mRNA | 530471 | 532621 |
| exon | 530471 | 530707 |
| exon | 530795 | 530877 |
| exon | 531162 | 531288 |
| exon | 532095 | 532174 |
| exon | 532254 | 532343 |
| exon | 532482 | 532621 |
| CDS | 530515 | 530707 |
| CDS | 530795 | 530877 |
| CDS | 531162 | 531288 |
| CDS | 532095 | 532174 |
| CDS | 532254 | 532343 |
| CDS | 532482 | 532610 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Carbohydrate_Esterases | CE13 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03283.12 | PAE | 49 | 395 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.