PH01000606G0060's details annotation
1.Annotation
ICBR annotation: STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
Blast result AT1G69220 : 2.00E-76
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01000606
Strand: -
| Region | Start | End |
| gene | 34707 | 39043 |
| mRNA | 34707 | 39043 |
| exon | 34707 | 35212 |
| exon | 35318 | 35403 |
| exon | 35497 | 35675 |
| exon | 35912 | 36081 |
| exon | 36195 | 36345 |
| exon | 36891 | 36996 |
| exon | 37076 | 37192 |
| exon | 37301 | 37382 |
| exon | 37805 | 37904 |
| exon | 38642 | 39043 |
| CDS | 35113 | 35212 |
| CDS | 35318 | 35403 |
| CDS | 35497 | 35675 |
| CDS | 35912 | 36081 |
| CDS | 36195 | 36345 |
| CDS | 36891 | 36996 |
| CDS | 37076 | 37192 |
| CDS | 37301 | 37382 |
| CDS | 37805 | 37904 |
| CDS | 38642 | 38777 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001333 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.