PH01000617G0170's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G03345 : 3.40E-34
Blast annotation: -
2.Location
Scaffold: PH01000617
Strand: -
| Region | Start | End |
| gene | 113143 | 115420 |
| mRNA | 113143 | 115420 |
| exon | 113143 | 113270 |
| exon | 114256 | 114356 |
| exon | 114584 | 114636 |
| exon | 114746 | 114818 |
| exon | 115117 | 115420 |
| CDS | 113177 | 113270 |
| CDS | 114256 | 114356 |
| CDS | 114584 | 114636 |
| CDS | 114746 | 114818 |
| CDS | 115117 | 115140 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10270.8 | MMgT | 9 | 64 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.