PH01000619G0530's details annotation
1.Annotation
ICBR annotation: WD domain, G-beta repeat domain containing protein, expressed
Blast result AT1G29260 : 1.40E-90
Blast annotation: peroxin 7
2.Location
Scaffold: PH01000619
Strand: -
| Region | Start | End |
| gene | 362665 | 368918 |
| mRNA | 362665 | 368918 |
| exon | 362665 | 362805 |
| exon | 364105 | 364846 |
| exon | 366286 | 368918 |
| CDS | 362770 | 362805 |
| CDS | 364105 | 364846 |
| CDS | 366286 | 366716 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00400.31 | WD40 | 228 | 266 |
| PF00400.31 | WD40 | 273 | 309 |
| PF00400.31 | WD40 | 318 | 352 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Peroxisome | peroxin-7 | ko04146 | K13341 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.