PH01000624G0460's details annotation
1.Annotation
ICBR annotation: phosphopantothenate--cysteine ligase, putative, expressed
Blast result AT1G12350 : 7.60E-68
Blast annotation: 4-phospho-panto-thenoylcysteine synthetase
2.Location
Scaffold: PH01000624
Strand: +
| Region | Start | End |
| gene | 303052 | 308877 |
| mRNA | 303052 | 308877 |
| exon | 303052 | 304144 |
| exon | 304503 | 304565 |
| exon | 304817 | 304902 |
| exon | 306864 | 306955 |
| exon | 307068 | 307127 |
| exon | 307199 | 307273 |
| exon | 307522 | 307623 |
| exon | 308251 | 308370 |
| exon | 308540 | 308877 |
| CDS | 303990 | 304144 |
| CDS | 304503 | 304565 |
| CDS | 304817 | 304902 |
| CDS | 306864 | 306955 |
| CDS | 307068 | 307127 |
| CDS | 307199 | 307273 |
| CDS | 307522 | 307623 |
| CDS | 308251 | 308370 |
| CDS | 308540 | 308794 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04127.14 | DFP | 180 | 283 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.