Annotation of co-expression genes

PH01000626G0620's details annotation

1.Annotation

ICBR annotation: 25.3 kDa vesicle transport protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000626
Strand: +

RegionStartEnd
gene486758488551
mRNA486758488551
exon486758488551
CDS488271488468

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0006810transport

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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