PH01000630G0450's details annotation
1.Annotation
ICBR annotation: alpha-1,4-fucosyltransferase, putative, expressed
Blast result AT1G71990 : 2.40E-46
Blast annotation: fucosyltransferase 13
2.Location
Scaffold: PH01000630
Strand: +
| Region | Start | End |
| gene | 392184 | 393468 |
| mRNA | 392184 | 393468 |
| exon | 392184 | 392491 |
| exon | 392581 | 392694 |
| exon | 392838 | 393468 |
| CDS | 392406 | 392491 |
| CDS | 392581 | 392694 |
| CDS | 392838 | 393396 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT10 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00852.18 | Glyco_transf_10 | 148 | 218 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Various types of N-glycan biosynthesis | alpha-1,4-fucosyltransferase [EC:2.4.1.-] | ko00513 | K14412 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006486 | protein glycosylation |
| GO:0008417 | fucosyltransferase activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.