PH01000640G0190's details annotation
1.Annotation
ICBR annotation: cyclin, putative, expressed
Blast result AT4G03270 : 1.00E-32
Blast annotation: Cyclin D6;1
2.Location
Scaffold: PH01000640
Strand: -
| Region | Start | End |
| gene | 138828 | 141407 |
| mRNA | 138828 | 141407 |
| exon | 138828 | 139758 |
| exon | 140282 | 140283 |
| exon | 140414 | 140621 |
| exon | 140729 | 140830 |
| exon | 140912 | 141019 |
| exon | 141108 | 141407 |
| CDS | 139555 | 139758 |
| CDS | 140282 | 140283 |
| CDS | 140414 | 140621 |
| CDS | 140729 | 140830 |
| CDS | 140912 | 141019 |
| CDS | 141108 | 141305 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00134.22 | Cyclin_N | 57 | 157 |
| PF02984.18 | Cyclin_C | 161 | 255 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.