PH01000648G0210's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G07970 : 2.00E-150
Blast annotation: -
2.Location
Scaffold: PH01000648
Strand: +
| Region | Start | End |
| gene | 95282 | 101015 |
| mRNA | 95282 | 101015 |
| exon | 95282 | 96943 |
| exon | 97037 | 97222 |
| exon | 97395 | 98232 |
| exon | 98326 | 98524 |
| exon | 98708 | 98887 |
| exon | 99042 | 99415 |
| exon | 100332 | 101015 |
| CDS | 96759 | 96943 |
| CDS | 97037 | 97222 |
| CDS | 97395 | 98232 |
| CDS | 98326 | 98524 |
| CDS | 98708 | 98887 |
| CDS | 99042 | 99415 |
| CDS | 100332 | 100472 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09786.8 | CytochromB561_N | 17 | 695 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.