PH01000648G0520's details annotation 1.Annotation ICBR annotation: SacI homology domain containing protein, expressed
Blast result AT3G51830 : 1.70E-72 Blast annotation: SAC domain-containing protein 8 2.Location Scaffold: PH01000648 Strand: - Region | Start | End | gene | 356840 | 362963 | mRNA | 356840 | 362963 | exon | 356840 | 357320 | exon | 357398 | 357464 | exon | 357574 | 357660 | exon | 358080 | 358173 | exon | 358277 | 358349 | exon | 358419 | 358573 | exon | 359320 | 359415 | exon | 359572 | 359636 | exon | 361479 | 362963 | CDS | 357193 | 357320 | CDS | 357398 | 357464 | CDS | 357574 | 357660 | CDS | 358080 | 358173 | CDS | 358277 | 358349 | CDS | 358419 | 358573 | CDS | 359320 | 359415 | CDS | 359572 | 359636 | CDS | 361479 | 361904 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000764 | RNA-dependent DNA replication, RNA-directed DNA polymerase activity, protein import into mitochondrial outer membrane, vacuolar transport, mitochondrial outer membrane translocase complex, retromer complex, cell communication, mTERF Transcription_Regulator(from iTAK) myosin complex, phosphoric ester hydrolase activity, phosphatidylinositol binding, motor activity, RNA binding,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00078.26 | RVT_1 | 23 | 135 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003723 | RNA binding | GO:0003964 | RNA-directed DNA polymerase activity | GO:0006278 | RNA-dependent DNA replication | GO:0042578 | phosphoric ester hydrolase activity |
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