PH01000657G0610's details annotation
1.Annotation
ICBR annotation: disease resistance protein, putative
Blast result AT3G50950 : 3.60E-75
Blast annotation: HOPZ-ACTIVATED RESISTANCE 1
2.Location
Scaffold: PH01000657
Strand: -
| Region | Start | End |
| gene | 450961 | 455273 |
| mRNA | 450961 | 455273 |
| exon | 450961 | 455273 |
| CDS | 451753 | 454755 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000954 | defense response, ADP_binding acid phosphatase activity, Ubiquitin_mediated_proteolysis acid-amino acid ligase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00931.21 | NB-ARC | 188 | 454 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006952 | defense response |
| GO:0043531 | ADP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.