PH01000666G0870's details annotation
1.Annotation
ICBR annotation: tyrosine protein kinase domain containing protein, putative, expressed
Blast result AT2G05940 : 6.00E-135
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01000666
Strand: +
| Region | Start | End |
| gene | 531023 | 535386 |
| mRNA | 531023 | 535386 |
| exon | 531023 | 531501 |
| exon | 532682 | 532817 |
| exon | 533769 | 533905 |
| exon | 534382 | 535386 |
| CDS | 531073 | 531501 |
| CDS | 532682 | 532817 |
| CDS | 533769 | 533905 |
| CDS | 534382 | 534990 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001560 | HB-KNOX Transcription_Regulator(from iTAK) GT48 GlycosylTransferases |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07714.16 | Pkinase_Tyr | 97 | 313 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.