PH01000669G0160's details annotation
1.Annotation
ICBR annotation: nascent polypeptide-associated complex subunit alpha-like protein 3, putative, expressed
Blast result AT3G49470 : 5.30E-48
Blast annotation: nascent polypeptide-associated complex subunit alpha-like protein 2
2.Location
Scaffold: PH01000669
Strand: +
| Region | Start | End |
| gene | 106883 | 109969 |
| mRNA | 106883 | 109969 |
| exon | 106883 | 107087 |
| exon | 108040 | 108124 |
| exon | 109063 | 109187 |
| exon | 109289 | 109969 |
| CDS | 107025 | 107087 |
| CDS | 108040 | 108124 |
| CDS | 109063 | 109187 |
| CDS | 109289 | 109621 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01849.17 | NAC | 63 | 118 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.