Gene details

Annotation of co-expression genes

PH01000669G0720's details annotation

1.Annotation

ICBR annotation: recA protein, expressed

Blast result AT3G10140 : 9.40E-72
Blast annotation: RECA homolog 3

2.Location

Scaffold: PH01000669
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000622	exocyst, SOS_response DNA-dependent ATPase activity, single-stranded DNA binding, DNA metabolic process, exocytosis, RLK-Pelle_RLCK-VIIa-2 (from iTAK) NAC Transcription_Regulator(from PlantTFDB)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00154.20	RecA	51	267

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0003677	DNA binding
GO:0003697	single-stranded DNA binding
GO:0005524	ATP binding
GO:0006259	DNA metabolic process
GO:0006281	DNA repair
GO:0008094	DNA-dependent ATPase activity
GO:0009432	SOS response
GO:0017111	nucleoside-triphosphatase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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