PH01000681G0050's details annotation
1.Annotation
ICBR annotation: stripe rust resistance protein Yr10, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000681
Strand: -
| Region | Start | End |
| gene | 26446 | 29600 |
| mRNA | 26446 | 29600 |
| exon | 26446 | 26527 |
| exon | 27220 | 27277 |
| exon | 27447 | 28462 |
| exon | 28803 | 29600 |
| CDS | 26465 | 26527 |
| CDS | 27220 | 27277 |
| CDS | 27447 | 28462 |
| CDS | 28803 | 29357 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000133 | C2H2 Transcription_Regulator(from PlantTFDB) RWP-RK Transcription_Regulator(from iTAK) Nin-like Transcription_Regulator(from PlantTFDB) carbohydrate phosphorylation, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00931.21 | NB-ARC | 2 | 144 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0043531 | ADP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.