PH01000684G0180's details annotation
1.Annotation
ICBR annotation: holocarboxylase synthetase, putative, expressed
Blast result AT4G09830 : 1.60E-39
Blast annotation: Uncharacterised conserved protein UCP009193
2.Location
Scaffold: PH01000684
Strand: -
| Region | Start | End |
| gene | 112260 | 115893 |
| mRNA | 112260 | 115893 |
| exon | 112260 | 113346 |
| exon | 113936 | 114016 |
| exon | 114798 | 115893 |
| CDS | 112975 | 113346 |
| CDS | 113936 | 114016 |
| CDS | 114798 | 115019 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.