PH01000690G0320's details annotation
1.Annotation
ICBR annotation: ADP-ribosylation factor, putative, expressed
Blast result AT5G17060 : 4.90E-92
Blast annotation: ADP-ribosylation factor B1B
2.Location
Scaffold: PH01000690
Strand: +
| Region | Start | End |
| gene | 218069 | 224643 |
| mRNA | 218069 | 224643 |
| exon | 218069 | 220412 |
| exon | 220503 | 220593 |
| exon | 221023 | 221138 |
| exon | 222555 | 222614 |
| exon | 222697 | 222762 |
| exon | 223662 | 223794 |
| exon | 223976 | 224643 |
| CDS | 220356 | 220412 |
| CDS | 220503 | 220593 |
| CDS | 221023 | 221138 |
| CDS | 222555 | 222614 |
| CDS | 222697 | 222762 |
| CDS | 223662 | 223794 |
| CDS | 223976 | 224088 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00025.20 | Arf | 7 | 176 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005525 | GTP binding |
| GO:0005622 | intracellular |
| GO:0006886 | intracellular protein transport |
| GO:0007264 | small GTPase mediated signal transduction |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.