PH01000690G0740's details annotation
1.Annotation
ICBR annotation: hypothetical_protein
Blast result AT4G19110 : 6.70E-99
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01000690
Strand: +
| Region | Start | End |
| gene | 485891 | 493348 |
| mRNA | 485891 | 493348 |
| exon | 485891 | 488028 |
| exon | 488249 | 488318 |
| exon | 489073 | 489141 |
| exon | 489221 | 489310 |
| exon | 489393 | 489531 |
| exon | 489771 | 489873 |
| exon | 489970 | 490022 |
| exon | 490108 | 490174 |
| exon | 490327 | 490435 |
| exon | 490699 | 490853 |
| exon | 491006 | 491114 |
| exon | 491549 | 491614 |
| exon | 491703 | 491771 |
| exon | 491868 | 491934 |
| exon | 492014 | 492130 |
| exon | 492425 | 493348 |
| CDS | 487958 | 488028 |
| CDS | 488249 | 488318 |
| CDS | 489073 | 489141 |
| CDS | 489221 | 489310 |
| CDS | 489393 | 489531 |
| CDS | 489771 | 489873 |
| CDS | 489970 | 490022 |
| CDS | 490108 | 490174 |
| CDS | 490327 | 490435 |
| CDS | 490699 | 490853 |
| CDS | 491006 | 491114 |
| CDS | 491549 | 491614 |
| CDS | 491703 | 491771 |
| CDS | 491868 | 491934 |
| CDS | 492014 | 492130 |
| CDS | 492425 | 492657 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 40 | 260 |
| PF00069.24 | Pkinase | 285 | 389 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.